Michiel Kleinnijenhuis

Kleinnijenhuis, M., Mollink, J., Lam, W. W., Kinchesh, P., Khrapitchev, A. A., Smart, S. C., Miller, K. L. (2017). Choice of reference measurements affects quantification of long diffusion time behaviour using stimulated echoes. Magnetic Resonance in Medicine, in press. doi:10.1002/mrm.26711

Mollink, J., Kleinnijenhuis, M., van Cappellen van Walsum, A. M., Sotiropoulos, S. N., Cottaar, M., Mirfin, C., Miller, K. L. (2017). Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging. NeuroImage, 157(June), 561–574. doi:10.1016/j.neuroimage.2017.06.001

Xu, T., Foxley, S., Kleinnijenhuis, M., Chen, W. C., Miller, K. L. (2017). The effect of realistic geometries on the susceptibility-weighted MR signal in white matter. Magnetic Resonance in Medicine, in press. doi:10.1002/mrm.26689

Mollink J., van Baarsen K.M., Dederen P.J.W.C., Foxley S., Miller K.L., Jbabdi S., Slump C.H., Grotenhuis J.A., Kleinnijenhuis M., van Cappellen van Walsum A.M. (2015). Dentatorubrothalamic tract localization with post mortem MR diffusion tractography compared to histological 3D reconstruction. Brain Structure and Function, 221(7), 3487-3501. doi:10.1007/s00429-015-1115-7

van Baarsen K.M., Kleinnijenhuis M., Jbabdi S., Sotiropoulos S.N., Grotenhuis, J.A., van Cappellen van Walsum A.M. (2015). A probabilistic atlas of the cerebellar white matter. NeuroImage, 124(A), 724-732. doi:10.1016/j.neuroimage.2015.09.014

Kleinnijenhuis M., van Mourik T., Norris D.G., Ruiter D.J., van Cappellen van Walsum A-M., Barth M. (2015) Diffusion tensor characteristics of gyrencephaly using high resolution diffusion tensor imaging in vivo at 7T. NeuroImage, 109, 378-387. doi:10.1016/j.neuroimage.2015.01.001

Dudink, J., Pieterman, K., Leemans, A., Kleinnijenhuis, M., van Cappellen van Walsum, A. M., & Hoebeek, F. E. (2015). Recent advancements in diffusion MRI for investigating cortical development after preterm birth — potential and pitfalls. Frontiers in Human Neuroscience, 8(January), 1–7. doi:10.3389/fnhum.2014.01066

Arnts, H., Kleinnijenhuis, M., Kooloos, J., Schepens-Franke, A., & Van Cappellen van Walsum, A.-M. (2014). Combining fiber dissection, plastination, and tractography for neuroanatomical education: Revealing the cerebellar nuclei and their white matter connections. Anatomical Sciences Education, 7(1), 47-55. doi:10.1002/ase.1385

Van Baarsen, K., Kleinnijenhuis, M., Konert, T., Van Cappellen van Walsum, A.-M., & Grotenhuis, A. (2013). Tractography demonstrates dentate-rubro-thalamic tract disruption in an adult with cerebellar mutism. The Cerebellum, 12(5), 617-622. doi:10.1007/s12311-013-0473-z

Kleinnijenhuis, M., Zerbi, V., Kuesters, B., Slump, C. H., Barth, M., & Van Cappellen van Walsum, A.-M. (2013). Layer-specific diffusion weighted imaging in human primary visual cortex in vitro. Cortex, 49(9), 2569-2582. doi:10.1016/j.cortex.2012.11.015

Zerbi, V.*, Kleinnijenhuis, M.*, Fang, X., Jansen, D., Veltien, A., Van Asten, J., Timmer, N., et al. (2012). Gray and white matter degeneration revealed by diffusion in an Alzheimer mouse model. Neurobiology of aging, 34(5), 1440-1450. doi:10.1016/j.neurobiolaging.2012.11.017 *equal contribution

Kleinnijenhuis, M., Barth, M., Alexander, D. C., Van Cappellen van Walsum, A.-M., & Norris, D. G. (2012). Structure Tensor Informed Fiber Tractography (STIFT) by combining gradient echo MRI and diffusion weighted imaging. NeuroImage, 59(4), 3941-54. doi:10.1016/j.neuroimage.2011.10.078

Spronk, D., Kleinnijenhuis, M., Van Luijtelaar, G., & Arns, M. (2010). Discrete-Trial SCP and GSR Training and the Interrelationship Between Central and Peripheral Arousal. Journal of Neurotherapy, 14(3), 217-228. doi:10.1080/10874208.2010.501501

Kleinnijenhuis, M., Arns, M., Spronk, D., Breteler, R., & Duysens, J. (2008). Comparison of Discrete-Trial-Based SMR and SCP Training and the Interrelationship Between SCP and SMR Networks: Implications for Brain-Computer Interfaces and Neurofeedback. Journal of Neurotherapy, 11(4), 19-35. doi:10.1080/10874200802162808

Arns, M., Kleinnijenhuis, M., Fallahpour, K., & Breteler, R. (2008). Golf Performance Enhancement and Real-Life Neurofeedback Training Using Personalized Event-Locked EEG Profiles. Journal of Neurotherapy, 11(4), 11-18. doi:10.1080/10874200802149656

Kleinnijenhuis, M. (2017). NeuroBlender: a Blender add-on for creating neuroscience artwork. In Organization for Human Brain Mapping (p. 1699). Vancouver, Canada. OHBM abstract

Kleinnijenhuis, M., Johnson, E. E., Mollink, J., Jbabdi, S., & Miller, K. L. (2017). A 3D electron microscopy segmentation pipeline for hyper-realistic diffusion simulations. In Organization for Human Brain Mapping (p. 1735). Vancouver, Canada. OHBM abstract

Mollink, J., Jbabdi, S., Smith, S. M., Alfaro-almagro, F., van Cappellen van Walsum, A-M., & Miller, K. L. (2017). Fibre orientation dispersion in the corpus callosum relates to interhemispheric functional connectivity. In Organization for Human Brain Mapping (p. 4019). Vancouver, Canada. OHBM abstract OHBM poster

Kleinnijenhuis, M., Johnson, E., Mollink, J., Jbabdi, S., Miller, K.L. (2017). A 3D electron microscopy segmentation pipeline for hyper-realistic diffusion simulations. Proceedings of the International Society for Magnetic Resonance in Medicine (p. 1090). Honolulu, USA. ISMRM abstract

Mollink, J., Jbabdi, S., Smith, S. M., Alfaro-almagro, F., van Cappellen van Walsum, A-M., & Miller, K. L. (2017). Fibre orientation dispersion in the corpus callosum relates to interhemispheric functional connectivity. Proceedings of the International Society for Magnetic Resonance in Medicine (p. 461). Honolulu, USA. ISMRM abstract ISMRM video

Kleinnijenhuis, M., Mollink, J., Johnson, E. E., Galinsky, V. L., Frank, L. R., Jbabdi, S., & Miller, K. L. (2016). The effect of axon shape and myelination on diffusion signals in a realistic simulation environment. Neuroscience 2016 Abstracts. San Diego, USA.

Kleinnijenhuis, M., Mollink, J., Johnson, E. E., Galinsky, V. L., Frank, L. R., Jbabdi, S., & Miller, K. L. (2016). The effect of axon shape and myelination on diffusion signals in a realistic simulation environment. Organization for Human Brain Mapping. Geneva, Switzerland.

Mollink, J., Kleinnijenhuis, M., Sotiropoulos, S. N., Cottaar, M., Pallebage Gamarallage, M., Ansorge, O., … Miller, K. L. (2016). Exploring fibre orientation dispersion in the corpus callosum: Comparison of Diffusion MRI, Polarized Light Imaging and Histology. Organization for Human Brain Mapping. Geneva, Switzerland.

Kleinnijenhuis, M., Mollink, J., Johnson, E. E., Galinsky, V. L., Frank, L. R., Jbabdi, S., & Miller, K. L. (2016). The effect of axon shape and myelination on diffusion signals in a realistic Monte Carlo simulation environment. Proceedings of the International Society for Magnetic Resonance in Medicine (p. 1994). Singapore.

Mollink, J., Kleinnijenhuis, M., Sotiropoulos, S. N., Cottaar, M., Pallebage Gamarallage, M., Ansorge, O., … Miller, K. L. (2016). Exploring fibre orientation dispersion in the corpus callosum: Comparison of Diffusion MRI, Polarized Light Imaging and Histology. Proceedings of the International Society for Magnetic Resonance in Medicine. Singapore.

Edwards, L. J., Mohammadi, S., Bazin, P.-L., Kleinnijenhuis, M., Pine, K. J., van Cappellen van Walsum, A.-M., Weiskopf, N. (2016). Modelling radial and tangential fibres in the neocortex. Proceedings of the International Society for Magnetic Resonance in Medicine. Singapore.

Kleinnijenhuis, M., Mollink, J., Kinchesh, P., Lam, W. W., Khrapitchev, A. A., Sibson, N. R., Miller, K. L. (2015). Monte Carlo simulations disambiguate the biophysical mechanisms of diffusion hindrance along tracts. Organization for Human Brain Mapping (p. 1769). Honolulu, USA.

Mollink, J., Kleinnijenhuis, M., Jbabdi, S., Sotiropoulos, S. N., Ansorge, O., & Miller, K. L. (2015). Fiber dispersion in the corpus callosum revealed with postmortem diffusion weighted imaging and PLI. Organization for Human Brain Mapping (p. 4103). Honolulu, USA.

Tariq, M., Kleinnijenhuis, M., van Cappellen van Walsum, A.-M., & Zhang, H. (2015). Validation of NODDI estimation of dispersion anisotropy in V1 of the human neocortex. Organization for Human Brain Mapping (p. 2223). Honolulu, USA.

Kleinnijenhuis, M., Mollink, J., Kinchesh, P., Lam, W.W., Galinsky, V.L., Frank, L.R., Smart, S.C., Jbabdi, S., & Miller, K.L. (2015). Monte Carlo diffusion simulations disambiguate the biophysical mechanisms of diffusion hinderance along tracts. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 24, p. 2756). Toronto, Canada.

Xu, T., Foxley, S., Kleinnijenhuis, M., & Miller, K. (2015). The role of myelin geometry on magnetic susceptibility-driven frequency shifts: toward realistic geometries. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 23, p. 8). Toronto, Canada.

Mollink, J., Kleinnijenhuis, M., Sotiropoulos, S.N., Ansorge, O., Jbabdi, S., & Miller, K.L. (2015). Diffusion restriction along fibres: How coherent is the corpus callosum? Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 23, p. 2783). Toronto, Canada.

Tariq, M., Kleinnijenhuis, M., van Cappellen van Walsum, A.-M., & Zhang, H. (2015). Validation of NODDI estimation of dispersion anisotropy in V1 of the human neocortex. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 23, p. 477). Toronto, Canada.

Kinchesh, P., Kleinnijenhuis, M., Miller, K.L., & Smart, S. (2015). Minimizing Diffusion Encoding of Slice Selection in Stimulated Echo Imaging. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 23, p. 2791). Toronto, Canada.

Lam, W.W., Miller, K.L., Kleinnijenhuis, M., & Jbabdi, S. (2015). Longitudinally hindered diffusion of in vivo human white matter at long diffusion time. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 23, p. 2776). Toronto, Canada.

Kleinnijenhuis, M., van Mourik, T., Norris, D.G., Ruiter, D.J., van Cappellen van Walsum, A-M., & Barth, M. (2014). Laminar characteristics of gyrencephaly using high resolution diffusion tensor imaging in vivo at 7T. Organization for Human Brain Mapping (p. 3875). Hamburg, Germany.

Mollink, J., van Baarsen, K., Slump, C.H., Foxley, S., Miller, K.L., Norris, D.G., Kleinnijenhuis, M., & van Cappellen van Walsum, A-M. (2014). Validation of diffusion weighted tractography in the dentatorubrothalamic tract. Organization for Human Brain Mapping (p. 3925). Hamburg, Germany, 2014.

Mollink, J., van Baarsen, K., Slump, C.H., Foxley, S., Miller, K.L., Norris, D.G., Kleinnijenhuis, M., & van Cappellen van Walsum, A-M. (2014). Validation of diffusion weighted tractography in the dentatorubrothalamic tract. Nederlandse Anatomenvereniging. Lunteren, The Netherlands, 2014.

Kleinnijenhuis, M., Zhang, H., Wiedermann, D., Norris, D. G. & Van Cappellen van Walsum, A.-M. (2013). Detailed laminar characteristics of the human neocortex revealed by NODDI. International Conference on Magnetic Resonance Microscopy Cambridge, United Kingdom.

Kleinnijenhuis, M., Zhang, H., Wiedermann, D., Kuesters, B. Norris, D. G., & Van Cappellen van Walsum, A.-M. (2013). Detailed laminar characteristics of the human neocortex revealed by NODDI and histology. Organization for Human Brain Mapping (p. 3815). Seattle, United States of America.

Kleinnijenhuis, M., Zhang, H., Wiedermann, D., Kuesters, B., Van Cappellen van Walsum, A.-M., & Norris, D. G. (2013). Detailed laminar characteristics of the human neocortex revealed by NODDI. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 21, p. 837). Salt Lake City, United States of America.

Arnts, H., Kleinnijenhuis, M., Kooloos, J., Schepens-Franke, A., & Van Cappellen van Walsum, A.-M. (2012). Dissectie en plastinatie van witte stof in humane hersenen voor neuroanatomisch onderwijs. Nederlandse vereniging voor Medisch Onderwijs. Maastricht, The Netherlands.

Kleinnijenhuis, M., Barth, M., Zerbi, V., Sikma, K.-J., Kuesters, B., Slump, C. H., Norris, D. G., Ruiter, D.J., & Van Cappellen van Walsum, A.-M. (2012). A new perspective on the cortical laminar pattern of the primary visual cortex in the occipital lobes. International School of Clinical Neuroanatomy: the Clinical Neuroanatomy of the Occipital Lobes. Ragusa, Italy.

Kleinnijenhuis, M., Barth, M., Zerbi, V., Sikma, K.-J., Kuesters, B., Slump, C. H., Norris, D. G., Ruiter, D.J., & Van Cappellen van Walsum, A.-M. (2011). In vitro layer-specific Diffusion Weighted Imaging in human primary visual cortex. Nederlandse Vereniging voor Technische Geneeskunde. Woerden, The Netherlands.

Kleinnijenhuis, M., Barth, M., Zerbi, V., Sikma, K.-J., Kuesters, B., Slump, C. H., Norris, D. G., Ruiter, D.J., & Van Cappellen van Walsum, A.-M. (2011). In vitro layer-specific Diffusion Weighted Imaging in human primary visual cortex. Brain Circuitry and its Disorders. Doorwerth, The Netherlands.

Kleinnijenhuis, M., Barth, M., Alexander, D. C., Van Cappellen van Walsum, A.-M., & Norris, D. G. (2011). Structure Tensor Informed Fiber Tractography. Hahn lecture (p. 5).

Kleinnijenhuis, M., Barth, M., Zerbi, V., Sikma, K.-J., Kuesters, B., Slump, C. H., Norris, D. G., Ruiter, D.J., & Van Cappellen van Walsum, A.-M. (2011). Layer-specific diffusion weighted imaging in human primary visual cortex in vitro. Organization for Human Brain Mapping (p. 986). Quebec City, Canada.

Kleinnijenhuis, M., Sikma, K.-J., Barth, M., Dederen, P. J., Zerbi, V., Kuesters, B., Ruiter, D. J., Slump, C. H., & van Cappellen van Walsum, A.-M. (2011). Validation of Diffusion Weighted Imaging of cortical anisotropy by means of a histological stain for myelin. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 19, p. 2085).

Kleinnijenhuis, M., Sikma, K.-J., Barth, M., Dederen, P. J., Zerbi, V., Kuesters, B., Ruiter, D.J., Slump, C. H., & van Cappellen van Walsum, A.-M. (2011). Validation of Diffusion Weighted Imaging of cortical anisotropy by means of a histological stain for myelin. Proceedings of the International Society for Magnetic Resonance in Medicine: Benelux chapter.

Sikma, K.-J., Kleinnijenhuis, M., Barth, M., Dederen, P. J., Kuesters, B., Slump, C. H., & Van Cappellen van Walsum, A.-M. (2010). Validating tractography from DWI/SWI data with 3D reconstructed histological data of post-mortem human brain tissue. Nederlandse Vereniging voor Technische Geneeskunde. Enschede, The Netherlands.

Kleinnijenhuis, M., Barth, M., Alexander, D. C., Van Cappellen van Walsum, A.-M., & Norris, D. G. (2010). SWI-informed Diffusion Tensor Tractography. Proceedings of the International Society for Magnetic Resonance in Medicine (Vol. 18, p. 4021). Stockholm, Sweden.

Breteler, R., Kleinnijenhuis, M., Spronk, D., Heesen, E., & Arns, M. (2006). The acquisition of control in self-regulation of Galvanic skin response and slow cortical potentials: A randomized trial. In E. Peper & M. Fuhs (Eds.), Applied Psychophysiology and Biofeedback: Abstracts of Scientific Papers Presented at the 10th Anniversary Meeting of the Biofeedback Foundation of Europe (pp. 354-355). Vienna, Austria.

Kleinnijenhuis, M., Arns, M. W., & Rijpma, J. (2006). Golf performance enhancement by means of real-life neurofeedback training based on personalized event-locked EEG profiles. In E. Peper & M. Fuhs (Eds.), Applied Psychophysiology and Biofeedback: Abstracts of Scientific Papers Presented at the 10th Anniversary Meeting of the Biofeedback Foundation of Europe (Vol. 31, pp. 346-347). Vienna, Austria.

Fallahpour, K., Kleinnijenhuis, M., Arns, M.W. (2011). Peak Performance Using Personalized and Task-Specific Event-Locked EEG: A Wireless, Personalized Medicine Approach to Sports Performance Enhancement. In: Strack BW, Linden MK, Wilson VS (eds). Biofeedback & Neurofeedback Applications in Sport Psychology. Association for Applied Psychophysiology and Biofeedback.

Arns, M. W., Slootweg, G. A., & Kleinnijenhuis, M. (2007). Apparatus for measuring one or more physiological functions of a body and a method using the same. US20070299323.

Kleinnijenhuis, M. (2014). Imaging fibres in the brain. PhD Thesis, Radboud University Nijmegen, Nijmegen, The Netherlands.

Kleinnijenhuis, M. (2007). Comparison of SMR and SCP training employing a newly developed discrete-trial based biofeedback system: Implications for Brain-Computer Interfaces, Neurofeedback and the interrelationship between SCP and SMR networks. MSc Thesis, Radboud University Nijmegen, Nijmegen, The Netherlands.

Kleinnijenhuis, M. (2003). Hoge Definitie Encefalografie: de gevolgen van samplefrequentieverlaging bij HDE. BSc Thesis, Saxion Hogeschool Enschede, Enschede, The Netherlands.