cifti correlate

Usage

Run using mc_script cifti correlate after installation or using ~ndcn0236/bin/mc_script cifti correlate on jalapeno.

Import in python using from mcutils.scripts.cifti import correlate

Documentation

Correlates two CIFTI files

Functions

correlate(dconn1, dconn2[, select_features])	Correlates two memory mapped arrays
correlate_arr(arr1, arr2[, collapse])	Computes the Pearson r correlation for two arrays
run(dconn1, dconn2[, split_greyordinates])	Computes the correlation between dense connectomes

CLI interface

add_to_parser(parser)	Creates the parser of the command line arguments
run_from_args(args)	Runs the script based on a Namespace containing the command line arguments

Classes

FakeDConn(dtseries)	Pretends to be a nibabel image of the dconn file
FakeDConnDataObject(dtseries)	Pretends to be a nibabel dataobject of a dconn file