to_nifti¶

Import in python using from mcutils.scripts.to_dataframe import to_nifti

mcutils.scripts.to_dataframe.to_nifti(dataframe, names, reference)[source]¶

Writes the data from a pandas dataframe to a NIFTI file on disc

Parameters

filename – NIFTI output filename
dataframe – Pandas dataframe listing the voxels and resulting data
names – columns to export
reference – reference image to set size and affine

Returns

Nibabel NIFTI image