get_brain_model

Import in python using from mcutils.scripts.cifti.ptx2dconn import get_brain_model

mcutils.scripts.cifti.ptx2dconn.get_brain_model(filename: str, assumed_hemis=None) → nibabel.cifti2.cifti2_axes.BrainModelAxis

Creates a CIFTI BrainModel axis based on the provided file

Parameters

• filename –

  can be one of the following:

  • dense CIFTI file, whose BrainModel axis should be adopted

  • single volume (NIFTI) or surface (GIFTI/ASCII) used as a mask

  • list of volumes and surfaces

• assumed_hemis – editable list of hemispheres each surface is assumed to be

Returns

BrainModelAxis describing the dataset