multi_reg

Import in python using from mcutils.register.multi_image import multi_reg

mcutils.register.multi_image.multi_reg(tree: fsl.utils.filetree.filetree.FileTree, images, iter=3, wait_for=(), flags=())[source]

Register multiple images to each other

Parameters

  • tree – input/output filenames

  • images – mapping from image identifier to filename (or template key in tree)

  • iter – number of iterations

  • wait_for – jobs to wait for before registration

  • flags – sequence of flags to add to the FLIRT call

Returns

tuple of job ids that job dependent on the registration should wait for