utils.sidecar

Documentation

Implements the xps data structure described by Markus Nilsson (https://github.com/markus-nilsson/md-dmri/blob/master/mdm/readme.txt)

This quantifies multiple diffusion encoding data

Functions

angle2bvec(phi, theta)
angle2fullrot(phi, theta, psi)
bt2b(bt)	Derives b-value from the b-tensor
bt2btensor(bt)	Converts flattend b-value into b-tensor using
btensor2bt(btensor)	Flattens the b-tensor
bvec2angle(bvec)	Converts the symmetry axis to an angle
concat(*parts)	Concatenate multiple MDE XPS objects
decompose(btensor)	Decomposes the b-tensor into eigen-values and symmetry axis
eigenvalues2shape(b, b_delta, b_eta)
fullrot2angle(bvec, bvec2)	Converts the symmetry + secondary axes to an angle
get_sidecar(filename)	Gets the sidecar corresponding to a known file
reconstruct(b_passxx, b_passyy, b_passzz, …)	Reconstructs the b-tensor based on the eigen-values/vectos
register_conversion(input, output)

Classes

AcquisitionParams(*args, **kwargs)