Probtrackx
 GPU

HOW TO INSTALL Probtrackx GPU

  • Download the correct probtrackx2_gpu file for your CUDA version
  • Unzip probtrackx2_gpu file
  • Copy the binary file into your $FSLDIR/bin directory
  • To execute it use: $FSLDIR/bin/probtrackx2_gpu

FSL 6.x FILES

Ampere architecture, and CUDA 11.x binaries will be supported within FSL installer starting from FSL 6.0.6

FSL 5.x FILES

CITATION

 If you use Probtrackx GPU in publications, please cite:

Hernandez-Fernandez M., Reguly I., Jbabdi S, Giles M, Smith S., Sotiropoulos S.N. "Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes." NeuroImage 188 (2019): 598-615.

Paper