Chapter 12

Preparing fMRI Data for Statistical Analysis

Author: Steve M. Smith (FMRIB Centre, Oxford)

Section 12.1. Introduction
Section 12.2. Reconstruction from Raw K-Space Data
Section 12.3. Slice Timing Correction
Section 12.4. Motion Correction
Section 12.5. Spatial Filtering
12.5.1: Reasons for spatial filtering
12.5.2: Implementation of spatial filtering
12.5.3: Example results

Section 12.6. Intensity Normalisation
Section 12.7. Temporal Filtering
12.7.1: High-pass
12.7.2: Low-pass

Section 12.8. Conclusion