mcot.surface

Installation instructions

You can install this package using:

pip install mcot.surface

The command line scripts from this package (and any other packages installed from mcot) can be listed as:

mcot

Or if you want all mcot packages (including all command line scripts)

pip install mcot

Documentation

Utilities for working with cortical meshes

To calculate the gyral coordinate system see mcot.gcoord.

Modules

mcot.surface.cortex	Defines cortical layers/cortices defined by 2 or more cortical meshes.
mcot.surface.cortical_mesh	Extends the functionality defined in mesh.py to include anatomical information.
mcot.surface.grid	Defines many functions that take both a grid and a mesh as input.
mcot.surface.mesh	Defines N-1 dimensional surfaces in N-dimensional space.
mcot.surface.test_data
mcot.surface.track	Run deterministic tractography along the surface.
mcot.surface.utils